Community Services

Community Services are tools and resources developed by the Portuguese research community and endorsed by BioData.pt
Title Responsible organisation EDAM Topic
D-cellerate IGC RNA-Seq
CoV2ID: Detection and Therapeutics Oligo Database for SARS-CoV-2 IDENTIFICA genetic testing Viruses
Ready for BioData Management? INESC-ID Data management
Biome-Shiny IGC Metagenomics
PHENO iBET Genotype and phenotype
PhagePromoter Universidade do Minho Computational biology
WebSpecmine Universidade do Minho Machine learning
merlin Universidade do Minho Systems biology
CoBAMP Universidade do Minho Systems biology
EvoPPI IBMC Protein interactions
Bioinformatics Docker Images Project IBMC Genomics
Python Video Annotator Fundação Champalimaud Data visualisation
OptFlux Universidade do Minho Systems biology
GOEnrichment Instituto Gulbenkian de Ciência Gene-set enrichment analysis
BLAST DataBase Manager IBMC Data management
ADOPS IBMC Sequence analysis
SEDA IBMC Nucleic acid sequence analysis
EbolaID CIIMAR - University of Porto Probes and primers
MITOBREAK CIIMAR - University of Porto DNA mutation
NCBI Mass Downloader CoBiG², cE3c Data retrieval
4Pipe4 CoBiG², cE3c operation
Structure_threader CoBiG², cE3c operation
TriFusion Diogo Silva Sequence alignment analysis
Stem Cell Net Systems Biology and Bioinformatics Laboratory
Stem Checker Systems Biology and Bioinformatics Laboratory

Registration

To see your service listed here, please register it at bio.tools, and contact us to list your service as a Community Service.
Follow our tutorial on how to register your service in bio.tools, or contact us if you need help.

Ackowledgements

If you use these services, please acknowledge:
- BioData.pt – Infraestrutura Portuguesa de Dados Biológicos refª 22231/01/SAICT/2016, funded by Portugal 2020.